PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_7610_iso_6
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family MYB_related
Protein Properties Length: 151aa    MW: 16611.9 Da    PI: 6.6028
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_7610_iso_6genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.94.1e-1226541646
                                         HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
                      Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqk 46
                                          +++G++ W++Ia++++ gRt++++k++w++
  cra_locus_7610_iso_6_len_1377_ver_3 26 AAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 54
                                         5799***.*********.***********96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.417160IPR017930Myb domain
CDDcd001675.78E-92554No hitNo description
PfamPF002493.4E-102654IPR001005SANT/Myb domain
SuperFamilySSF466898.58E-102663IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.2E-142756IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MAELPSTGRS EGKYNTGGAV VDHGAAAKWG NRWSKIAKHL PGRTDNEIKN YWRTRIQKHI  60
KQAENNFTGQ SSNEQNHDQG STSQMSTTSS SHHHHNHAGG GGGGDAVETY SPPSYQANFE  120
AAFQNPFPTD QSTDNIWSME DLWPMQLLSG D
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098762.12e-45PREDICTED: myb-related protein 305
SwissprotP813912e-38MYB05_ANTMA; Myb-related protein 305
TrEMBLA0A068U0Q27e-47A0A068U0Q2_COFCA; Uncharacterized protein
STRINGSolyc02g067760.2.11e-42(Solanum lycopersicum)